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    DUF868 family protein (DUF868) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834880, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF868 family protein (DUF868)
    Primary source
    TAIR:AT5G48270
    Locus tag
    AT5G48270
    See related
    Araport:AT5G48270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIF21.16; MIF21_16
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (19564422..19565968, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene acetoacetyl-CoA thiolase 2 Neighboring gene Rrp15p protein Neighboring gene B-box type zinc finger protein with CCT domain-containing protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124202.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DUF868 family protein (DUF868)
    NP_199638.1
    • Plant protein of unknown function (DUF868); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT4G12690.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19564422..19565968 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124202.3 → NP_199638.1  DUF868 family protein (DUF868) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199638.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKM6, A0A7G2FL68, Q9LUA7
      Conserved Domains (1) summary
      pfam05910
      Location:39 → 320
      DUF868; Plant protein of unknown function (DUF868)
    Nucleotide Protein
    Heading Accession and Version

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