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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835122, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G50540
    Locus tag
    AT5G50540
    See related
    Araport:AT5G50540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MFB16.7
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (20574577..20575538, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Molecular chaperone Hsp40/DnaJ family protein Neighboring gene Major facilitator superfamily protein Neighboring gene CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene transmembrane protein, putative (DUF 3339) Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel approach to dissect the abscission process in Arabidopsis. González-Carranza ZH, et al. Plant Physiol, 2012 Nov. PMID 22992509, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124441.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within floral organ abscission IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_568737.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50645.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20574577..20575538 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124441.4 → NP_568737.1  uncharacterized protein AT5G50540 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568737.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9FGP4
    Nucleotide Protein
    Heading Accession and Version

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