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    stress response NST1-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835332, updated on 18-Sep-2024

    Summary

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    Official Full Name
    stress response NST1-like protein
    Primary source
    TAIR:AT5G52550
    Locus tag
    AT5G52550
    See related
    Araport:AT5G52550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6N7.3; F6N7_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (21327712..21330136, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RNA-binding protein-like RNA recognition motif protein Neighboring gene uncharacterized protein Neighboring gene UDP-sugar pyrophosphorylase Neighboring gene beta-carotene hydroxylase 2 Neighboring gene RabGAP/TBC domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of proteins that interact with catalytically active calcium-dependent protein kinases from Arabidopsis. Uno Y, et al. Mol Genet Genomics, 2009 Apr. PMID 19130088
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Miscellaneous features

    • Loc: c21329277-21329119 AT5G52550.uORF1
    NM_124634.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    stress response NST1-like protein
    NP_568774.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25670.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21327712..21330136 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124634.2 → NP_568774.1  stress response NST1-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568774.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDD6, Q940C2
      Conserved Domains (1) summary
      pfam08287
      Location:31 → 105
      DASH_Spc19; Spc19
    Nucleotide Protein
    Heading Accession and Version

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