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    methyltransferase C9orf114 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832050, updated on 18-Sep-2024

    Summary

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    Official Full Name
    methyltransferase C9orf114 protein
    Primary source
    TAIR:AT5G19300
    Locus tag
    AT5G19300
    See related
    Araport:AT5G19300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7K24.50; F7K24_50
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (6495434..6498332)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene kinase associated protein phosphatase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene homeotic protein regulator Neighboring gene Defensin-like (DEFL) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_121935.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    methyltransferase C9orf114 protein
    NP_197431.2
    • CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Protein of unknown function DUF171 (InterPro:IPR003750); Has 3649 Blast hits to 1964 proteins in 291 species: Archae - 113; Bacteria - 121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses - 4; Other Eukaryotes - 1703 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6495434..6498332
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121935.4 → NP_197431.2  methyltransferase C9orf114 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197431.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULS8, Q6NLH7
      Conserved Domains (1) summary
      pfam02598
      Location:100 → 387
      Methyltrn_RNA_3; Putative RNA methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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