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    XID myosin XI D [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817886, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XID
    Official Full Name
    myosin XI D
    Primary source
    TAIR:AT2G33240
    Locus tag
    AT2G33240
    See related
    Araport:AT2G33240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATXID; F25I18.2; F25I18_2; myosin XI D; MYOSIN XI D
    Summary
    member of Myosin-like proteins
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    Genomic context

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    See XID in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    42
    Sequence:
    Chromosome: 2; NC_003071.7 (14086584..14097285, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene GRIM-19 protein Neighboring gene YUCCA 7 Neighboring gene low-molecular-weight cysteine-rich 49 Neighboring gene uncharacterized protein Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence. Reddy AS, et al. Genome Biol, 2001. PMID 11516337, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001336438.1
    NM_001336439.1
    NM_001336440.1
    NM_128883.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cytoskeletal motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cytoskeletal motor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within actin filament-based movement TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myosin XI D
    NP_180882.2
    • myosin XI D (XID); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: myosin XI A (TAIR:AT1G04600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14086584..14097285 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336434.1 → NP_001324212.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZD5, A0A7G2EGW4
      Conserved Domains (5) summary
      cd15475
      Location:1274 → 1715
      MyosinXI_CBD; cargo binding domain of myosin XI
      TIGR03490
      Location:1453 → 1542
      Mycoplas_LppA; mycoides cluster lipoprotein, LppA/P72 family
      cd01384
      Location:74 → 718
      MYSc_Myo11; class XI myosin, motor domain
      pfam02736
      Location:9 → 46
      Myosin_N; Myosin N-terminal SH3-like domain
      cl25732
      Location:885 → 1221
      SMC_N; RecF/RecN/SMC N terminal domain

    2. NM_001336435.1 → NP_001324208.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZG5, A0A654EZV0

    3. NM_001336436.1 → NP_001324211.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EZV0

    4. NM_001336437.1 → NP_001324213.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZF2

    5. NM_128883.3 → NP_180882.2  myosin XI D [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180882.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IVR7, Q8RYE8
      UniProtKB/TrEMBL
      A0A654EZV0
      Conserved Domains (7) summary
      smart00242
      Location:76 → 744
      MYSc; Myosin. Large ATPases
      cd15475
      Location:1298 → 1739
      MyosinXI_CBD; cargo binding domain of myosin XI
      cd01384
      Location:92 → 736
      MYSc_Myo11; class XI myosin, motor domain
      pfam02736
      Location:28 → 64
      Myosin_N; Myosin N-terminal SH3-like domain
      pfam08202
      Location:987 → 1241
      MIS13; Mis12-Mtw1 protein family
      pfam12718
      Location:926 → 1068
      Tropomyosin_1; Tropomyosin like
      pfam15898
      Location:937 → 1023
      PRKG1_interact; cGMP-dependent protein kinase interacting domain

    6. NM_001336438.1 → NP_001324210.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VNQ2, A0A1P8AZF4

    7. NM_001336439.1 → NP_001324209.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZE5, A0A654EZV0

    8. NM_001336440.1 → NP_001324214.1  myosin XI D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AZE5, A0A654EZV0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4IVR7.1

    Gene LinkOut

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