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    AOX1D alternative oxidase 1D [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840127, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AOX1D
    Official Full Name
    alternative oxidase 1D
    Primary source
    TAIR:AT1G32350
    Locus tag
    AT1G32350
    See related
    Araport:AT1G32350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    alternative oxidase 1D; F27G20.12
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    Genomic context

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    See AOX1D in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (11666886..11668690, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NDR1/HIN1-like 8 Neighboring gene miscRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparison of the response of alternative oxidase and uncoupling proteins to bacterial elicitor induced oxidative burst. Czobor Á, et al. PLoS One, 2019. PMID 30629714, Free PMC Article
    2. Alternative Oxidase Isoforms Are Differentially Activated by Tricarboxylic Acid Cycle Intermediates. Selinski J, et al. Plant Physiol, 2018 Feb. PMID 29208641, Free PMC Article
    3. Analysis of Posttranslational Activation of Alternative Oxidase Isoforms. Selinski J, et al. Plant Physiol, 2017 Aug. PMID 28596420, Free PMC Article
    4. Protein phosphatase 2A (PP2A) regulatory subunit B'γ interacts with cytoplasmic ACONITASE 3 and modulates the abundance of AOX1A and AOX1D in Arabidopsis thaliana. Konert G, et al. New Phytol, 2015 Feb. PMID 25307043
    5. Functional Relationship of Arabidopsis AOXs and PTOX Revealed via Transgenic Analysis. Wang D, et al. Front Plant Sci, 2021. PMID 34367216, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Similar to the expression of AOX1a the expression of AOX1d was also significantly elevated due to Pseudomonas syringae harpin protein treatment. Similar to the expression and activity of AOX, the transcript level of UCP4, UCP5 and the UCP activity increased due to Pseudomonas syringae harpin protein treatment and the consequential oxidative burst.
      Title: Comparison of the response of alternative oxidase and uncoupling proteins to bacterial elicitor induced oxidative burst.
    2. AOX1D activation by Tricarboxylic acid cycle Intermediate 2-oxoglutarate.
      Title: Alternative Oxidase Isoforms Are Differentially Activated by Tricarboxylic Acid Cycle Intermediates.
    3. AOX isoforms are differentially activated and that activation at CysI and CysII is additive.
      Title: Analysis of Posttranslational Activation of Alternative Oxidase Isoforms.
    4. PP2A-B'gamma physically interacts with the cytoplasmic form of aconitase and PP2A-B'gamma impacts reactive oxygen species homeostasis by controlling the abundance of specific alternative oxidase isoforms, AOX1A and AOX1D, in leaf mitochondria.
      Title: Protein phosphatase 2A (PP2A) regulatory subunit B'γ interacts with cytoplasmic ACONITASE 3 and modulates the abundance of AOX1A and AOX1D in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001333005.1
    NM_102968.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alternative oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables alternative oxidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables superoxide-generating NADPH oxidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ubiquinol:oxygen oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    alternative oxidase 1D
    NP_564395.1
    • alternative oxidase 1D (AOX1D); FUNCTIONS IN: alternative oxidase activity; INVOLVED IN: oxidation reduction, response to cyclopentenone; LOCATED IN: mitochondrial envelope, mitochondrion; EXPRESSED IN: stem, sepal, leaf, stamen; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alternative oxidase (InterPro:IPR002680); BEST Arabidopsis thaliana protein match is: alternative oxidase 1A (TAIR:AT3G22370.1); Has 1297 Blast hits to 1297 proteins in 245 species: Archae - 0; Bacteria - 109; Metazoa - 12; Fungi - 194; Plants - 377; Viruses - 0; Other Eukaryotes - 605 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11666886..11668690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102968.3 → NP_564395.1  alternative oxidase 1D [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564395.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LEE7, Q8VY45, Q9C612, Q9LQM4
      UniProtKB/TrEMBL
      A0A178WBF6, A0A384LFI3, A0A654EEP6, Q08A65
      Conserved Domains (1) summary
      PLN02478
      Location:1 → 318
      PLN02478; alternative oxidase

    2. NM_001333005.1 → NP_001320824.1  alternative oxidase 1D [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AP13, A0A654EEP6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LEE7.2

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