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    BOR5 HCO3- transporter family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843820, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BOR5
    Official Full Name
    HCO3- transporter family
    Primary source
    TAIR:AT1G74810
    Locus tag
    AT1G74810
    See related
    Araport:AT1G74810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F9E10.34; F9E10_34; REQUIRES HIGH BORON 5
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    Genomic context

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    See BOR5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (28107822..28111940)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Nodulin-like / Major Facilitator Superfamily protein Neighboring gene catalytics Neighboring gene Galactosyltransferase family protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593) Neighboring gene Homeodomain-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables solute:inorganic anion antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in monoatomic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    HCO3- transporter family
    NP_001319383.1
    • BOR5; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G15460.1); Has 2579 Blast hits to 1402 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1942; Fungi - 299; Plants - 229; Viruses - 2; Other Eukaryotes - 103 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28107822..28111940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334668.1 → NP_001322361.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATS9

    2. NM_001334669.1 → NP_001322362.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATS7, A0A5S9WUE3

    3. NM_106139.3 → NP_177619.2  HCO3- transporter family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177619.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9P1, Q9SSG5
      UniProtKB/TrEMBL
      A0A178WFC4, A0A5S9WUE3
      Conserved Domains (1) summary
      cl23746
      Location:6 → 555
      Xan_ur_permease; Permease family

    4. NM_001334670.1 → NP_001322363.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATR0, A0A5S9WUE3, A0A654EZQ8
      Conserved Domains (1) summary
      cl26877
      Location:20 → 507
      Band_3_cyto; Band 3 cytoplasmic domain

    5. NM_001334671.1 → NP_001322364.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATS7, A0A5S9WUE3

    6. NM_001334672.1 → NP_001322360.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9P1, Q9SSG5
      UniProtKB/TrEMBL
      A0A178WFC4, A0A5S9WUE3
      Conserved Domains (1) summary
      cl23746
      Location:6 → 555
      Xan_ur_permease; Permease family

    7. NM_001334667.1 → NP_001319383.1  HCO3- transporter family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9P1, Q9SSG5
      UniProtKB/TrEMBL
      A0A178WFC4, A0A5S9WUE3
      Conserved Domains (1) summary
      cl23746
      Location:6 → 555
      Xan_ur_permease; Permease family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SSG5.1

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