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    9330198N18Rik RIKEN cDNA 9330198N18 gene [ Mus musculus (house mouse) ]

    Gene ID: 77516, updated on 17-Aug-2024

    Summary

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    Official Symbol
    9330198N18Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 9330198N18 geneprovided by MGI
    Primary source
    MGI:MGI:1924766
    See related
    Ensembl:ENSMUSG00000120768 AllianceGenome:MGI:1924766
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See 9330198N18Rik in Genome Data Viewer
    Location:
    2 B; 2 21.71 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (30519247..30565184)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (30629559..30656198)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10089 Neighboring gene STARR-seq mESC enhancer starr_04102 Neighboring gene predicted gene, 31585 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30442791-30442999 Neighboring gene STARR-positive B cell enhancer ABC_E4428 Neighboring gene CSA-conditional, T cell activation-dependent protein Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30492055-30492256 Neighboring gene VISTA enhancer mm1612 Neighboring gene predicted gene, 32316 Neighboring gene predicted gene 14486 Neighboring gene uncharacterized LOC115489511 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30547431-30547614 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:30547653-30547840 Neighboring gene STARR-positive B cell enhancer ABC_E4429 Neighboring gene STARR-positive B cell enhancer ABC_E10090 Neighboring gene STARR-positive B cell enhancer ABC_E9507 Neighboring gene STARR-positive B cell enhancer ABC_E4430 Neighboring gene predicted gene 14488 Neighboring gene microRNA 3089

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      30519247..30565184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004940872.1 RNA Sequence

    2. XR_004940876.1 RNA Sequence

    3. XR_004940875.1 RNA Sequence

    4. XR_004940871.1 RNA Sequence

    5. XR_004940874.1 RNA Sequence

    6. XR_004940873.1 RNA Sequence

    7. XR_004940877.1 RNA Sequence

      Related
      ENSMUST00000245714.1
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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