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    Ccdc51 coiled-coil domain containing 51 [ Mus musculus (house mouse) ]

    Gene ID: 66658, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ccdc51provided by MGI
    Official Full Name
    coiled-coil domain containing 51provided by MGI
    Primary source
    MGI:MGI:1913908
    See related
    Ensembl:ENSMUSG00000025645 AllianceGenome:MGI:1913908
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mitok; 5730568A12Rik
    Summary
    Enables mitochondrial ATP-gated potassium channel activity. Involved in potassium ion transmembrane transport. Located in mitochondrial inner membrane. Part of mitochondrial ATP-gated potassium channel complex. Orthologous to human CCDC51 (coiled-coil domain containing 51). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 3.5), large intestine adult (RPKM 3.3) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ccdc51 in Genome Data Viewer
    Location:
    9 F2; 9 59.63 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (108911564..108922431)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109082496..109093363)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5107 Neighboring gene predicted gene, 53191 Neighboring gene ATR interacting protein Neighboring gene STARR-positive B cell enhancer ABC_E1794 Neighboring gene translational machinery associated 7 Neighboring gene predicted gene 7628 Neighboring gene plexin B1 Neighboring gene STARR-seq mESC enhancer starr_25230 Neighboring gene F-box and WD-40 domain protein 21

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (2)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    mitochondrial potassium channel
    Names
    coiled-coil domain-containing protein 51

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025689.4NP_079965.2  mitochondrial potassium channel

      See identical proteins and their annotated locations for NP_079965.2

      Status: PROVISIONAL

      Source sequence(s)
      AK141240
      Consensus CDS
      CCDS52931.1
      UniProtKB/Swiss-Prot
      Q3URS9, Q4QQL1, Q9CXS1
      Related
      ENSMUSP00000026735.8, ENSMUST00000026735.9
      Conserved Domains (1) summary
      TIGR02169
      Location:109260
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      108911564..108922431
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)