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    GATL10 galacturonosyltransferase-like 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822462, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GATL10
    Official Full Name
    galacturonosyltransferase-like 10
    Primary source
    TAIR:AT3G28340
    Locus tag
    AT3G28340
    See related
    Araport:AT3G28340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    galactinol synthase 8; galacturonosyltransferase-like 10; GolS8
    Summary
    Encodes a protein with putative galacturonosyltransferase activity.
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    Genomic context

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    See GATL10 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (10588947..10590685, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene F-box family protein-like protein Neighboring gene uncharacterized protein Neighboring gene ABC transporter family protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Galactinol and raffinose constitute a novel function to protect plants from oxidative damage. Nishizawa A, et al. Plant Physiol, 2008 Jul. PMID 18502973, Free PMC Article
    2. Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. Sterling JD, et al. Proc Natl Acad Sci U S A, 2006 Mar 28. PMID 16540543, Free PMC Article
    3. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_113753.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pectin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to oxidative stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    galacturonosyltransferase-like 10
    NP_189474.2
    • galacturonosyltransferase-like 10 (GATL10); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: glucosyl transferase family 8 (TAIR:AT1G70090.2); Has 2215 Blast hits to 2207 proteins in 459 species: Archae - 2; Bacteria - 1092; Metazoa - 267; Fungi - 4; Plants - 737; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10588947..10590685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113753.5 → NP_189474.2  galacturonosyltransferase-like 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189474.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LHD2
      UniProtKB/TrEMBL
      A0A178VA90, W8QNM3
      Conserved Domains (1) summary
      pfam01501
      Location:72 → 328
      Glyco_transf_8; Glycosyl transferase family 8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHD2.1

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