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    phenazine biosynthesis PhzC/PhzF family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828160, updated on 18-Sep-2024

    Summary

    Official Full Name
    phenazine biosynthesis PhzC/PhzF family protein
    Primary source
    TAIR:AT4G02850
    Locus tag
    AT4G02850
    See related
    Araport:AT4G02850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J8.17; T5J8_17
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (1266463..1268612, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene uncharacterized protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene Phenazine biosynthesis PhzC/PhzF protein Neighboring gene B3 domain protein

    General gene information

    NM_116519.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables amino-acid racemase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    phenazine biosynthesis PhzC/PhzF family protein
    NP_192194.2
    • phenazine biosynthesis PhzC/PhzF family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Phenazine biosynthesis PhzC/PhzF protein (InterPro:IPR003719); BEST Arabidopsis thaliana protein match is: Phenazine biosynthesis PhzC/PhzF protein (TAIR:AT1G03210.1); Has 3282 Blast hits to 3279 proteins in 1066 species: Archae - 40; Bacteria - 2414; Metazoa - 118; Fungi - 78; Plants - 90; Viruses - 0; Other Eukaryotes - 542 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1266463..1268612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116519.2NP_192194.2  phenazine biosynthesis PhzC/PhzF family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192194.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XPQ3, A0A654FLC9, Q66GM9
      Conserved Domains (1) summary
      pfam02567
      Location:14302
      PhzC-PhzF; Phenazine biosynthesis-like protein