U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MPK5 MAP kinase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826735, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MPK5
    Official Full Name
    MAP kinase 5
    Primary source
    TAIR:AT4G11330
    Locus tag
    AT4G11330
    See related
    Araport:AT4G11330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMPK5; F8L21.120; F8L21_120; MAP kinase 5
    Summary
    MAP kinase
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MPK5 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (6891926..6894283)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Papain family cysteine protease Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene transferring glycosyl group transferase (DUF604) Neighboring gene tRNA-Ala

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. ATMPKs: a gene family of plant MAP kinases in Arabidopsis thaliana. Mizoguchi T, et al. FEBS Lett, 1993 Dec 28. PMID 8282107
    2. The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis. Teige M, et al. Mol Cell, 2004 Jul 2. PMID 15225555
    3. Mitogen-activated protein kinase cascades in plants: a new nomenclature. MAPK Group. Trends Plant Sci, 2002 Jul. PMID 12119167
    4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_117204.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables MAP kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within MAPK cascade ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    MAP kinase 5
    NP_567378.4
    • MAP kinase 5 (MPK5); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), JNK MAP kinase (InterPro:IPR008351), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: MAP kinase 4 (TAIR:AT4G01370.1); Has 126445 Blast hits to 124887 proteins in 4831 species: Archae - 118; Bacteria - 13666; Metazoa - 48018; Fungi - 12607; Plants - 30504; Viruses - 585; Other Eukaryotes - 20947 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      6891926..6894283
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117204.7 → NP_567378.4  MAP kinase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567378.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q39025, Q67YV7, Q9SUS8
      UniProtKB/TrEMBL
      A0A178UYG8, A0A5S9XR91, K7DXB7
      Conserved Domains (2) summary
      smart00220
      Location:46 → 329
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cl21453
      Location:36 → 372
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q39025.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools