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    zinc ion binding / transcription regulator [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827697, updated on 18-Sep-2024

    Summary

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    Official Full Name
    zinc ion binding / transcription regulator
    Primary source
    TAIR:AT4G19550
    Locus tag
    AT4G19550
    See related
    Araport:AT4G19550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24J7.110; F24J7_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (10659253..10661311, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene disease resistance protein (TIR-NBS-LRR class) family Neighboring gene disease resistance protein (TIR-NBS-LRR class) family Neighboring gene INDH1(iron-sulfur protein required for NADH dehydrogenase) Neighboring gene Cyclin family protein Neighboring gene Chaperone DnaJ-domain superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001203844.1
    NM_118075.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zinc ion binding / transcription regulator
    NP_001190773.1
    • zinc ion binding;transcription regulators; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812).
    NP_193690.2
    • zinc ion binding;transcription regulators; FUNCTIONS IN: transcription regulator activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent, transcription initiation; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812); Has 916 Blast hits to 839 proteins in 148 species: Archae - 0; Bacteria - 97; Metazoa - 239; Fungi - 67; Plants - 82; Viruses - 13; Other Eukaryotes - 418 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10659253..10661311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203844.1 → NP_001190773.1  zinc ion binding / transcription regulator [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190773.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UV92, F4JT86

    2. NM_118075.6 → NP_193690.2  zinc ion binding / transcription regulator [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193690.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUI0, A0A5S9XTZ7, F4JT85
    Nucleotide Protein
    Heading Accession and Version

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