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    Calmodulin-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828685, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calmodulin-binding protein
    Primary source
    TAIR:AT4G25800
    Locus tag
    AT4G25800
    See related
    Araport:AT4G25800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14M19.80; F14M19_80
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (13124898..13128045)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene xyloglucan endotransglycosylase 6 Neighboring gene xyloglucan endotransglucosylase/hydrolase 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084979.1
    NM_118712.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Calmodulin-binding protein
    NP_001078448.1
    • Calmodulin-binding protein; FUNCTIONS IN: calmodulin binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 340 Blast hits to 325 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_194310.3
    • Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT5G57580.1); Has 340 Blast hits to 325 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 333; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13124898..13128045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118712.6 → NP_194310.3  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194310.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WVV6, Q9SW03
      UniProtKB/TrEMBL
      A0A178UXA6, A0A5S9XWR5
      Conserved Domains (1) summary
      pfam07887
      Location:83 → 375
      Calmodulin_bind; Calmodulin binding protein-like

    2. NM_001084979.1 → NP_001078448.1  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078448.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WVV6, Q9SW03
      UniProtKB/TrEMBL
      A0A178UXA6, A0A5S9XWR5
      Conserved Domains (1) summary
      pfam07887
      Location:83 → 375
      Calmodulin_bind; Calmodulin binding protein-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WVV6.1

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