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    Vmn1r13 vomeronasal 1 receptor 13 [ Mus musculus (house mouse) ]

    Gene ID: 113862, updated on 9-Dec-2024

    Summary

    Official Symbol
    Vmn1r13provided by MGI
    Official Full Name
    vomeronasal 1 receptor 13provided by MGI
    Primary source
    MGI:MGI:2148526
    See related
    Ensembl:ENSMUSG00000064259 AllianceGenome:MGI:2148526
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1rc5
    Summary
    Predicted to enable signaling receptor activity. Acts upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Vmn1r13 in Genome Data Viewer
    Location:
    6 B3; 6 27.82 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (57186843..57187745)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (57209858..57210760)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 12 Neighboring gene STARR-seq mESC enhancer starr_15998 Neighboring gene vomeronasal 1 receptor, pseudogene 8 Neighboring gene vomeronasal 1 receptor 14 Neighboring gene vomeronasal 1 receptor 15

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General protein information

    Preferred Names
    vomeronasal 1 receptor, C5
    Names
    vomernasal 1 receptor Vmn1r13
    vomeronasal type 1 receptor C5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053235.2NP_444465.2  vomeronasal 1 receptor, C5

      See identical proteins and their annotated locations for NP_444465.2

      Status: VALIDATED

      Source sequence(s)
      AC153696
      Consensus CDS
      CCDS20176.1
      UniProtKB/TrEMBL
      F6MAK1, F6MAK6, G5E8I3
      Related
      ENSMUSP00000077924.2, ENSMUST00000078885.2
      Conserved Domains (1) summary
      pfam03402
      Location:29294
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      57186843..57187745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)