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    ACT7 actin 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830841, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ACT7
    Official Full Name
    actin 7
    Primary source
    TAIR:AT5G09810
    Locus tag
    AT5G09810
    See related
    Araport:AT5G09810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ACT2; actin 2; actin 7; AtACT7; MYH9.2; MYH9_2
    Summary
    Member of Actin gene family.Mutants are defective in germination and root growth.
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    Genomic context

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    See ACT7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (3052062..3054691)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene inflorescence deficient in abscission (IDA)-like 3 Neighboring gene Plastid-lipid associated protein PAP / fibrillin family protein Neighboring gene BolA-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The arabidopsis ACT7 actin gene is expressed in rapidly developing tissues and responds to several external stimuli. McDowell JM, et al. Plant Physiol, 1996 Jul. PMID 8754679, Free PMC Article
    2. One plant actin isovariant, ACT7, is induced by auxin and required for normal callus formation. Kandasamy MK, et al. Plant Cell, 2001 Jul. PMID 11449050, Free PMC Article
    3. Arabidopsis actin gene ACT7 plays an essential role in germination and root growth. Gilliland LU, et al. Plant J, 2003 Jan. PMID 12535345
    4. Arabidopsis vegetative actin isoforms, AtACT2 and AtACT7, generate distinct filament arrays in living plant cells. Kijima ST, et al. Sci Rep, 2018 Mar 12. PMID 29531328, Free PMC Article
    5. The Arabidopsis ARCP protein, CSI1, which is required for microtubule stability, is necessary for root and anther development. Mei Y, et al. Plant Cell, 2012 Mar. PMID 22427339, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. different actin isoforms (ACT2 and ACT7) are capable of constructing unique filament arrays, depending on the cell type or tissue.
      Title: Arabidopsis vegetative actin isoforms, AtACT2 and AtACT7, generate distinct filament arrays in living plant cells.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    NM_121018.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cytoskeleton organization TAS
    Traceable Author Statement
    more info
    		  
    involved_in protein localization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to light stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within root epidermal cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within root hair elongation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within seed germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast stroma HDA PubMed 
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in nucleolus HDA PubMed 
    located_in plant-type cell wall HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    actin 7
    NP_196543.1
    • actin 7 (ACT7); FUNCTIONS IN: protein binding, structural constituent of cytoskeleton; INVOLVED IN: in 9 processes; LOCATED IN: mitochondrion, nucleolus, cell wall, cytoskeleton, plasma membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15241 Blast hits to 14839 proteins in 3047 species: Archae - 8; Bacteria - 21; Metazoa - 5732; Fungi - 5247; Plants - 1603; Viruses - 2; Other Eukaryotes - 2628 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3052062..3054691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121018.4 → NP_196543.1  actin 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196543.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P53492, P53495
      UniProtKB/TrEMBL
      A0A178UEW4, A0A5S9Y341, F1LIM0
      Conserved Domains (1) summary
      cl17037
      Location:5 → 377
      NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P53492.1

    Gene LinkOut

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