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    AGK2 guanylate kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824922, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AGK2
    Official Full Name
    guanylate kinase
    Primary source
    TAIR:AT3G57550
    Locus tag
    AT3G57550
    See related
    Araport:AT3G57550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GK-2; GUANYLATE KINAS; GUANYLATE KINAS 2; guanylate kinase
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    Genomic context

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    See AGK2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (21306609..21309570)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene calcium-dependent protein kinase 32 Neighboring gene Remorin family protein Neighboring gene N-acetyl-l-glutamate kinase Neighboring gene ARM repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning of the guanylate kinase homologues AGK-1 and AGK-2 from Arabidopsis thaliana and characterization of AGK-1. Kumar V, et al. Eur J Biochem, 2000 Jan. PMID 10632732
    2. The rice nuclear gene, VIRESCENT 2, is essential for chloroplast development and encodes a novel type of guanylate kinase targeted to plastids and mitochondria. Sugimoto H, et al. Plant J, 2007 Nov. PMID 17727616
    3. bHLH05 is an interaction partner of MYB51 and a novel regulator of glucosinolate biosynthesis in Arabidopsis. Frerigmann H, et al. Plant Physiol, 2014 Sep. PMID 25049362, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001035800.1
    NM_001339877.1
    NM_115615.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables guanylate kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gametophyte development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within nucleotide metabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in regulation of developmental growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    guanylate kinase
    NP_001030877.1
    • guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567051.1
    • guanylate kinase (AGK2); CONTAINS InterPro DOMAIN/s: Guanylate kinase (InterPro:IPR008144), Guanylate kinase/L-type calcium channel (InterPro:IPR008145), Guanylate kinase, conserved site (InterPro:IPR020590), Guanylate kinase, sub-group (InterPro:IPR017665); BEST Arabidopsis thaliana protein match is: guanylate kinase 1 (TAIR:AT2G41880.1); Has 9901 Blast hits to 9873 proteins in 2764 species: Archae - 0; Bacteria - 5418; Metazoa - 1587; Fungi - 182; Plants - 205; Viruses - 105; Other Eukaryotes - 2404 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21306609..21309570
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115615.3 → NP_567051.1  guanylate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567051.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M682, Q9SCL8
      UniProtKB/TrEMBL
      A0A178V9C8, A0A5S9XLN7
      Conserved Domains (1) summary
      PLN02772
      Location:1 → 389
      PLN02772; guanylate kinase

    2. NM_001035800.1 → NP_001030877.1  guanylate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030877.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XLN7, F4J3E9
      Conserved Domains (2) summary
      TIGR03263
      Location:138 → 318
      guanyl_kin; guanylate kinase
      PLN02772
      Location:1 → 390
      PLN02772; guanylate kinase

    3. NM_001339877.1 → NP_001325466.1  guanylate kinase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M682, Q9SCL8
      UniProtKB/TrEMBL
      A0A178V9C8, A0A5S9XLN7
      Conserved Domains (1) summary
      PLN02772
      Location:1 → 389
      PLN02772; guanylate kinase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M682.1

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