U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RR3 response regulator 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818730, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RR3
    Official Full Name
    response regulator 3
    Primary source
    TAIR:AT2G41310
    Locus tag
    AT2G41310
    See related
    Araport:AT2G41310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARR8; ATRR3; response regulator 3; RESPONSE REGULATOR 8
    Summary
    Encodes an A- type response Regulator that is primarily expressed in the root and is involved in cytokinin-mediated signalling.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RR3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (17221840..17224880)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene strictosidine synthase-like 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Glutaredoxin family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Overexpression of Arabidopsis response regulators, ARR4/ATRR1/IBC7 and ARR8/ATRR3, alters cytokinin responses differentially in the shoot and in callus formation. Osakabe Y, et al. Biochem Biophys Res Commun, 2002 May 3. PMID 12054542
    2. Stress-responsive expression of genes for two-component response regulator-like proteins in Arabidopsis thaliana. Urao T, et al. FEBS Lett, 1998 May 8. PMID 9607306
    3. Arabidopsis response regulators ARR3 and ARR4 play cytokinin-independent roles in the control of circadian period. Salomé PA, et al. Plant Cell, 2006 Jan. PMID 16326927, Free PMC Article
    4. Analysis of protein interactions within the cytokinin-signaling pathway of Arabidopsis thaliana. Dortay H, et al. FEBS J, 2006 Oct. PMID 16965536
    5. Two-component signal transduction pathways in Arabidopsis. Hwang I, et al. Plant Physiol, 2002 Jun. PMID 12068096, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_129695.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphorelay response regulator activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within circadian rhythm IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cytokinin-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cytokinin-activated signaling pathway TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphorelay signal transduction system ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    response regulator 3
    NP_181663.1
    • response regulator 3 (RR3); CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 9 (TAIR:AT3G57040.1); Has 36974 Blast hits to 36596 proteins in 2486 species: Archae - 189; Bacteria - 32197; Metazoa - 9; Fungi - 371; Plants - 1334; Viruses - 4; Other Eukaryotes - 2870 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17221840..17224880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129695.4 → NP_181663.1  response regulator 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181663.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80365
      UniProtKB/TrEMBL
      A0A654F283, Q0WRG3
      Conserved Domains (1) summary
      PLN03029
      Location:1 → 225
      PLN03029; type-a response regulator protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80365.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools