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    Transmembrane proteins 14C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824895, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Transmembrane proteins 14C
    Primary source
    TAIR:AT3G57280
    Locus tag
    AT3G57280
    See related
    Araport:AT3G57280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (21193680..21195790)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene beta-1,3-glucanase 2 Neighboring gene beta-1,3-glucanase 1 Neighboring gene eukaryotic translation initiation factor 3E Neighboring gene DNA helicase INO80-like protein Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis FAX1 mediated fatty acid export is required for the transcriptional regulation of anther development and pollen wall formation. Zhu L, et al. Plant Mol Biol, 2020 Sep. PMID 32681357
    2. Seed-specific overexpression of AtFAX1 increases seed oil content in Arabidopsis. Tian Y, et al. Biochem Biophys Res Commun, 2018 Jun 2. PMID 29654768
    3. FAX1, a novel membrane protein mediating plastid fatty acid export. Li N, et al. PLoS Biol, 2015 Feb. PMID 25646734, Free PMC Article
    4. Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. Ferro M, et al. Mol Cell Proteomics, 2003 May. PMID 12766230
    5. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Arabidopsis FAX1 mediated fatty acid export is required for the transcriptional regulation of anther development and pollen wall formation.
      Title: Arabidopsis FAX1 mediated fatty acid export is required for the transcriptional regulation of anther development and pollen wall formation.
    2. seed specific overexpression of AtFAX1 could promote oil accumulation in Arabidopsis seeds.[AtFAX1]
      Title: Seed-specific overexpression of AtFAX1 increases seed oil content in Arabidopsis.
    3. FAX1 mediates fatty acid export from plastids. [FAX1]
      Title: FAX1, a novel membrane protein mediating plastid fatty acid export.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_115588.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fatty acid transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within fatty acid transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within lipid homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type cell wall assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen wall assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen wall assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast inner membrane HDA PubMed 
    located_in chloroplast inner membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Transmembrane proteins 14C
    NP_567046.1
    • Transmembrane proteins 14C; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0136, Transmembrane (InterPro:IPR005349); BEST Arabidopsis thaliana protein match is: Transmembrane proteins 14C (TAIR:AT3G20510.1); Has 169 Blast hits to 169 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 27; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21193680..21195790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115588.4 → NP_567046.1  Transmembrane proteins 14C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567046.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93V66, Q9M2L9
      UniProtKB/TrEMBL
      A0A178VHH9, A0A5S9XLL5
      Conserved Domains (1) summary
      pfam03647
      Location:104 → 200
      Tmemb_14; Transmembrane proteins 14C
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93V66.1

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