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    ABCG33 pleiotropic drug resistance 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818305, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCG33
    Official Full Name
    pleiotropic drug resistance 5
    Primary source
    TAIR:AT2G37280
    Locus tag
    AT2G37280
    See related
    Araport:AT2G37280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette G33; ATPDR5; F3G5.7; F3G5_7; PDR5; pleiotropic drug resistance 5; PLEIOTROPIC DRUG RESISTANCE 5
    Summary
    Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.
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    Genomic context

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    See ABCG33 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    22
    Sequence:
    Chromosome: 2; NC_003071.7 (15650169..15656657)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene WRKY family transcription factor family protein Neighboring gene ribosomal protein 5B Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene uncharacterized protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ATP binding cassette proteins ABCG37 and ABCG33 function as potassium-independent cesium uptake carriers in Arabidopsis roots. Ashraf MA, et al. Mol Plant, 2021 Apr 5. PMID 33588076
    2. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ATP binding cassette proteins ABCG37 and ABCG33 function as potassium-independent cesium uptake carriers in Arabidopsis roots.
      Title: ATP binding cassette proteins ABCG37 and ABCG33 function as potassium-independent cesium uptake carriers in Arabidopsis roots.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001336646.1
    NM_001336647.1
    NM_129284.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within_negative_effect response to cesium ion IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    pleiotropic drug resistance 5
    NP_181265.1
    • pleiotropic drug resistance 5 (PDR5); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 9 (TAIR:AT3G53480.1); Has 443293 Blast hits to 292406 proteins in 4063 species: Archae - 8772; Bacteria - 359449; Metazoa - 10341; Fungi - 7279; Plants - 6493; Viruses - 4; Other Eukaryotes - 50955 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15650169..15656657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336645.1 → NP_001325069.1  pleiotropic drug resistance 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B240, A0A5S9X4T4, A0A654F4X2

    2. NM_129284.2 → NP_181265.1  pleiotropic drug resistance 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181265.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUT8
      UniProtKB/TrEMBL
      A0A178VYB7, A0A5S9X4T4, A0A654F4X2
      Conserved Domains (1) summary
      PLN03140
      Location:19 → 1413
      PLN03140; ABC transporter G family member; Provisional

    3. NM_001336647.1 → NP_001325070.1  pleiotropic drug resistance 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B215, A0A7G2EDY4

    4. NM_001336646.1 → NP_001325068.1  pleiotropic drug resistance 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B220, A0A5S9X4T4, A0A654F4X2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUT8.1

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