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    Adenine nucleotide alpha hydrolases-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825014, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Adenine nucleotide alpha hydrolases-like superfamily protein
    Primary source
    TAIR:AT3G58450
    Locus tag
    AT3G58450
    See related
    Araport:AT3G58450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (21621994..21623166)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene MATH domain/coiled-coil protein Neighboring gene TRAF-like superfamily protein Neighboring gene RHOMBOID-like protein 15 Neighboring gene nucleic acid binding / methyltransferase Neighboring gene calmodulin-binding family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GRUSP, an Universal Stress Protein, Is Involved in Gibberellin-dependent Induction of Flowering in Arabidopsis thaliana. Gorshkova DS, et al. Dokl Biochem Biophys, 2021 Jul. PMID 34426918, Free PMC Article
    2. The Gene Encoding the Universal Stress Protein AtUSP is Regulated by Phytohormones and Involved in Seed Germination of Arabidopsis thaliana. Gorshkova DS, et al. Dokl Biochem Biophys, 2018 Mar. PMID 29779109
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. GRUSP, an Universal Stress Protein, Is Involved in Gibberellin-dependent Induction of Flowering in Arabidopsis thaliana.
      Title: GRUSP, an Universal Stress Protein, Is Involved in Gibberellin-dependent Induction of Flowering in Arabidopsis thaliana.
    2. The Gene Encoding the Universal Stress Protein AtUSP is Regulated by Phytohormones and Involved in Seed Germination of Arabidopsis thaliana [USP]
      Title: The Gene Encoding the Universal Stress Protein AtUSP is Regulated by Phytohormones and Involved in Seed Germination of Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_115707.3
    NM_180386.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Adenine nucleotide alpha hydrolases-like superfamily protein
    NP_191404.2
    • Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.2); Has 5955 Blast hits to 5729 proteins in 1233 species: Archae - 504; Bacteria - 4276; Metazoa - 131; Fungi - 103; Plants - 779; Viruses - 0; Other Eukaryotes - 162 (source: NCBI BLink).
    NP_850717.1
    • Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G11930.1); Has 6272 Blast hits to 6041 proteins in 1248 species: Archae - 518; Bacteria - 4566; Metazoa - 135; Fungi - 97; Plants - 787; Viruses - 0; Other Eukaryotes - 169 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21621994..21623166
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180386.3 → NP_850717.1  Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850717.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XM69, A0A7G2EYE4, F4J5V2
      Conserved Domains (1) summary
      cd00293
      Location:32 → 180
      USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...

    2. NM_115707.3 → NP_191404.2  Adenine nucleotide alpha hydrolases-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191404.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCF6, A0A384KMS3, A0A5S9XM69, Q84JS5
      Conserved Domains (1) summary
      cd00293
      Location:32 → 187
      USP_Like; Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to ...
    Nucleotide Protein
    Heading Accession and Version

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