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    BCA3 beta carbonic anhydrase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838983, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BCA3
    Official Full Name
    beta carbonic anhydrase 3
    Primary source
    TAIR:AT1G23730
    Locus tag
    AT1G23730
    See related
    Araport:AT1G23730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBCA3; BETA CARBONIC ANHYDRASE 3; beta carbonic anhydrase 3; BETA CARBONIC ANHYDRASE 3; F5O8.28; F5O8_28
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    Genomic context

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    See BCA3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (8395466..8398387)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Proline-rich extensin-like family protein Neighboring gene Oxidoreductase, zinc-binding dehydrogenase family protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene BURP domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and expression analysis of genes encoding alpha and beta carbonic anhydrases in Arabidopsis. Fabre N, et al. Plant Cell Environ, 2007 May. PMID 17407539
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102221.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbon utilization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta carbonic anhydrase 3
    NP_173785.1
    • beta carbonic anhydrase 3 (BCA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 4 (TAIR:AT1G70410.1); Has 5075 Blast hits to 5060 proteins in 1504 species: Archae - 26; Bacteria - 3914; Metazoa - 59; Fungi - 205; Plants - 361; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8395466..8398387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332620.1 → NP_001321762.1  beta carbonic anhydrase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUC2
      UniProtKB/TrEMBL
      A0A654ECN3
      Conserved Domains (1) summary
      PLN00416
      Location:1 → 258
      PLN00416; carbonate dehydratase

    2. NM_102221.5 → NP_173785.1  beta carbonic anhydrase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173785.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZUC2
      UniProtKB/TrEMBL
      A0A654ECN3
      Conserved Domains (1) summary
      PLN00416
      Location:1 → 258
      PLN00416; carbonate dehydratase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZUC2.1

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