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    lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842417, updated on 18-Sep-2024

    Summary

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    Official Full Name
    lysine ketoglutarate reductase trans-splicing-like protein (DUF707)
    Primary source
    TAIR:AT1G61240
    Locus tag
    AT1G61240
    See related
    Araport:AT1G61240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11P17.21; F11P17_21
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    18
    Sequence:
    Chromosome: 1; NC_003070.9 (22581336..22585225)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene ncRNA Neighboring gene secretory carrier 3 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001084285.1
    NM_001124055.2
    NM_001333943.1
    NM_001333944.1
    NM_001333945.1
    NM_001333946.1
    NM_104805.3
    NM_202335.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lysine ketoglutarate reductase trans-splicing-like protein (DUF707)
    NP_001117527.1
    • Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001319280.1
    • Protein of unknown function (DUF707); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 307 Blast hits to 307 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_176319.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 307 Blast hits to 307 proteins in 22 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_974064.1
    • Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G11170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22581336..22585225
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333943.1 → NP_001319280.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    2. NM_001124055.2 → NP_001117527.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001117527.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    3. NM_001084285.1 → NP_001077754.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077754.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    4. NM_001333944.1 → NP_001321298.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    5. NM_202335.3 → NP_974064.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974064.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    6. NM_104805.3 → NP_176319.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176319.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WRH5, A0A654EQ26, Q8GYU5
      Conserved Domains (1) summary
      pfam05212
      Location:80 → 384
      DUF707; Protein of unknown function (DUF707)

    7. NM_001333945.1 → NP_001321297.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WKU2, A0A1P8AQF5

    8. NM_001333946.1 → NP_001321296.1  lysine ketoglutarate reductase trans-splicing-like protein (DUF707) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQH7, Q8H767
    Nucleotide Protein
    Heading Accession and Version

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