U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    hypothetical protein (DUF3755) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842361, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    hypothetical protein (DUF3755)
    Primary source
    TAIR:AT1G60670
    Locus tag
    AT1G60670
    See related
    Araport:AT1G60670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8A5.19; F8A5_19
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (22343585..22347624)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene stress response protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein Neighboring gene cytochrome B5-like protein Neighboring gene ncRNA Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene SMAD/FHA domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help
    NM_001084276.2
    NM_001333906.1
    NM_001333907.1
    NM_001333908.1
    NM_104750.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    hypothetical protein (DUF3755)
    NP_001077745.1
    • Protein of unknown function (DUF3755); INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3755 (InterPro:IPR022228); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 165 Blast hits to 165 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).
    NP_564760.2
    • CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3755) (TAIR:AT1G10820.2); Has 144 Blast hits to 144 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22343585..22347624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084276.2 → NP_001077745.1  hypothetical protein (DUF3755) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077745.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DZ24, Q94AP2
      Conserved Domains (1) summary
      pfam12579
      Location:182 → 214
      DUF3755; Protein of unknown function (DUF3755)

    2. NM_001333906.1 → NP_001322274.1  hypothetical protein (DUF3755) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DZ24, O22705

    3. NM_001333907.1 → NP_001322273.1  hypothetical protein (DUF3755) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATL4, A0A7G2DZ24

    4. NM_001333908.1 → NP_001322272.1  hypothetical protein (DUF3755) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ATJ3, A0A7G2DZ24

    5. NM_104750.3 → NP_564760.2  hypothetical protein (DUF3755) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564760.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MRN6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.