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    GRP23 glutamine-rich protein 23 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837566, updated on 18-Sep-2024

    Summary

    Official Symbol
    GRP23
    Official Full Name
    glutamine-rich protein 23
    Primary source
    TAIR:AT1G10270
    Locus tag
    AT1G10270
    See related
    Araport:AT1G10270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14N23.15; F14N23_15; glutamine-rich protein 23
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    Genomic context

    See GRP23 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (3363432..3366493)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene dynamin-like protein 6

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_100901.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    glutamine-rich protein 23
    NP_172498.1
    • glutamine-rich protein 23 (GRP23); FUNCTIONS IN: binding; INVOLVED IN: embryo development, cell division; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G49240.1); Has 43483 Blast hits to 18975 proteins in 889 species: Archae - 27; Bacteria - 1738; Metazoa - 7010; Fungi - 2820; Plants - 24944; Viruses - 157; Other Eukaryotes - 6787 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3363432..3366493
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100901.3NP_172498.1  glutamine-rich protein 23 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172498.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SY69
      UniProtKB/TrEMBL
      A0A178W2P4, A0A5S9TMP2, A0A654E8E5
      Conserved Domains (4) summary
      COG0457
      Location:184423
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00004
      Location:218245
      PPR; PPR repeat [structural motif]
      pfam03157
      Location:624905
      Glutenin_hmw; High molecular weight glutenin subunit
      pfam14559
      Location:448501
      TPR_19; Tetratricopeptide repeat