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    CPK25 calcium-dependent protein kinase 25 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818162, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CPK25
    Official Full Name
    calcium-dependent protein kinase 25
    Primary source
    TAIR:AT2G35890
    Locus tag
    AT2G35890
    See related
    Araport:AT2G35890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    calcium-dependent protein kinase 25; F11F19.20; F11F19_20
    Summary
    member of Calcium Dependent Protein Kinase
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    Genomic context

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    See CPK25 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (15066614..15069359, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene FASCICLIN-like arabinogalactan protein 16 precursor Neighboring gene TPX2 (targeting protein for Xklp2) protein family Neighboring gene ncRNA Neighboring gene Mal d 1-associated protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001336578.1
    NM_129148.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calcium-dependent protein kinase 25
    NP_001318361.1
    • calcium-dependent protein kinase 25 (CPK25); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calmodulin-domain protein kinase cdpk isoform 2 (TAIR:AT3G10660.1); Has 110743 Blast hits to 108941 proteins in 2972 species: Archae - 173; Bacteria - 14302; Metazoa - 39605; Fungi - 12638; Plants - 23064; Viruses - 489; Other Eukaryotes - 20472 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15066614..15069359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336578.1 → NP_001318361.1  calcium-dependent protein kinase 25 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ61
      UniProtKB/TrEMBL
      A0A178VQ54, A0A5S9X4V8, A0A7G2EDJ6
      Conserved Domains (2) summary
      COG5126
      Location:429 → 509
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      cd05117
      Location:132 → 389
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases

    2. NM_129148.2 → NP_181133.1  calcium-dependent protein kinase 25 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181133.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJ61
      UniProtKB/TrEMBL
      A0A178VQ54, A0A5S9X4V8, A0A7G2EDJ6
      Conserved Domains (2) summary
      COG5126
      Location:429 → 509
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]
      cd05117
      Location:132 → 389
      STKc_CAMK; The catalytic domain of CAMK family Serine/Threonine Kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJ61.1

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