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    TUA1 alpha-1 tubulin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842782, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TUA1
    Official Full Name
    alpha-1 tubulin
    Primary source
    TAIR:AT1G64740
    Locus tag
    AT1G64740
    See related
    Araport:AT1G64740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    alpha-1 tubulin; F13O11.5; F13O11_5
    Summary
    alpha-tubulin expressed primarily in stamens and mature pollen
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    Genomic context

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    See TUA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (24050006..24052487)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene deletion of SUV3 suppressor 1(I) Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene NDH-dependent cyclic electron flow 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. α-tubulin is rapidly phosphorylated in response to hyperosmotic stress in rice and Arabidopsis. Ban Y, et al. Plant Cell Physiol, 2013 Jun. PMID 23628996
    2. Preferential expression of an alpha-tubulin gene of Arabidopsis in pollen. Carpenter JL, et al. Plant Cell, 1992 May. PMID 1498610, Free PMC Article
    3. An atypical tubulin kinase mediates stress-induced microtubule depolymerization in Arabidopsis. Fujita S, et al. Curr Biol, 2013 Oct 21. PMID 24120637
    4. A novel plant kinesin-related protein specifically associates with the phragmoplast organelles. Lee YR, et al. Plant Cell, 2001 Nov. PMID 11701879, Free PMC Article
    5. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_105148.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule-based process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in nucleus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    alpha-1 tubulin
    NP_176654.1
    • alpha-1 tubulin (TUA1); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: microtubule-based process; LOCATED IN: microtubule cytoskeleton, cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Alpha tubulin (InterPro:IPR002452), Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain (InterPro:IPR003008), Tubulin/FtsZ, N-terminal (InterPro:IPR019746), Tubulin/FtsZ, C-terminal (InterPro:IPR008280), Beta tubulin, autoregulation binding site (InterPro:IPR013838), Tubulin, conserved site (InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich domain (InterPro:IPR018316); BEST Arabidopsis thaliana protein match is: tubulin alpha-5 (TAIR:AT5G19780.1); Has 22728 Blast hits to 22623 proteins in 4697 species: Archae - 12; Bacteria - 27; Metazoa - 4402; Fungi - 13423; Plants - 1534; Viruses - 0; Other Eukaryotes - 3330 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24050006..24052487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105148.3 → NP_176654.1  alpha-1 tubulin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176654.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P11139
      UniProtKB/TrEMBL
      A0A178WLQ0, A0A5S9WSA8, A0A654EL16
      Conserved Domains (1) summary
      PLN00221
      Location:1 → 435
      PLN00221; tubulin alpha chain; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P11139.1

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