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    ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837718, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ankyrin repeat family protein
    Primary source
    TAIR:AT1G11740
    Locus tag
    AT1G11740
    See related
    Araport:AT1G11740
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25C20.11; F25C20_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (3963054..3966850, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CLP protease proteolytic subunit 6 Neighboring gene Undecaprenyl pyrophosphate synthetase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101046.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ankyrin repeat family protein
    NP_172639.2
    • ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Protein of unknown function DUF3424 (InterPro:IPR021832), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G62050.1); Has 1132 Blast hits to 1026 proteins in 130 species: Archae - 4; Bacteria - 26; Metazoa - 550; Fungi - 29; Plants - 425; Viruses - 2; Other Eukaryotes - 96 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3963054..3966850 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101046.3 → NP_172639.2  ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172639.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WN86, A0A5S9TYP5, F4IAG4
      Conserved Domains (3) summary
      sd00045
      Location:77 → 108
      ANK; ANK repeat [structural motif]
      pfam11904
      Location:194 → 524
      GPCR_chapero_1; GPCR-chaperone
      cl39094
      Location:82 → 131
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein
    Heading Accession and Version

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