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    EMB2756 transmembrane protein (DUF616) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840358, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EMB2756
    Official Full Name
    transmembrane protein (DUF616)
    Primary source
    TAIR:AT1G34550
    Locus tag
    AT1G34550
    See related
    Araport:AT1G34550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 2756; F12K21.12; F12K21_12
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    Genomic context

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    See EMB2756 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (12646674..12652646, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF1184) Neighboring gene Essential protein Yae1, N-terminal

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103178.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein (DUF616)
    NP_174715.2
    • EMBRYO DEFECTIVE 2756 (EMB2756); INVOLVED IN: response to cadmium ion, embryo development ending in seed dormancy; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF616 (InterPro:IPR006852); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF616) (TAIR:AT4G09630.1); Has 593 Blast hits to 590 proteins in 103 species: Archae - 14; Bacteria - 45; Metazoa - 74; Fungi - 32; Plants - 255; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12646674..12652646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333112.1 → NP_001323111.1  transmembrane protein (DUF616) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W503, A0A1P8AW51

    2. NM_103178.2 → NP_174715.2  transmembrane protein (DUF616) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174715.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EGX2, F4HV06
      Conserved Domains (1) summary
      pfam04765
      Location:416 → 721
      DUF616; Protein of unknown function (DUF616)
    Nucleotide Protein
    Heading Accession and Version

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