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    HSFA8 heat shock transcription factor A8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843125, updated on 18-Sep-2024

    Summary

    Official Symbol
    HSFA8
    Official Full Name
    heat shock transcription factor A8
    Primary source
    TAIR:AT1G67970
    Locus tag
    AT1G67970
    See related
    Araport:AT1G67970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT-HSFA8; heat shock transcription factor A8; heat shock transcription factor A8; T23K23.18; T23K23_18
    Summary
    member of Heat Stress Transcription Factor (Hsf) family
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    Genomic context

    See HSFA8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (25484449..25486512, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene ncRNA Neighboring gene POLLEN DEFECTIVE IN GUIDANCE-like protein Neighboring gene caffeoyl-CoA 3-O-methyltransferase Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_105467.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    heat shock transcription factor A8
    NP_176964.1
    • heat shock transcription factor A8 (HSFA8); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock factor 1 (TAIR:AT4G17750.1); Has 2085 Blast hits to 2073 proteins in 225 species: Archae - 0; Bacteria - 3; Metazoa - 333; Fungi - 465; Plants - 781; Viruses - 0; Other Eukaryotes - 503 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25484449..25486512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105467.4NP_176964.1  heat shock transcription factor A8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176964.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S7U5
      UniProtKB/TrEMBL
      A0A178WF00, A0A5S9WSM2
      Conserved Domains (1) summary
      smart00415
      Location:17110
      HSF; heat shock factor