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    Auxin efflux carrier family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843986, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Auxin efflux carrier family protein
    Primary source
    TAIR:AT1G76530
    Locus tag
    AT1G76530
    See related
    Araport:AT1G76530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14G6.13; F14G6_13; PILS4; PIN-LIKES 4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (28718069..28720371)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ARID/BRIGHT DNA-binding domain-containing protein Neighboring gene Auxin efflux carrier family protein Neighboring gene cyclin-dependent kinase B2;1 Neighboring gene Phosphofructokinase family protein Neighboring gene CP12 domain-containing protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants. Barbez E, et al. Nature, 2012 Apr 15. PMID 22504182
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PILS4 is a member of the PIN-LIKES (PILS) protein family of putative auxin carriers residing at the endoplasmic reticulum.
      Title: A novel putative auxin carrier family regulates intracellular auxin homeostasis in plants.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001334730.1
    NM_001334731.1
    NM_001334732.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to cytosol auxin transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Auxin efflux carrier family protein
    NP_001319388.1
    • Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT1G76520.2); Has 560 Blast hits to 535 proteins in 95 species: Archae - 4; Bacteria - 2; Metazoa - 0; Fungi - 181; Plants - 324; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28718069..28720371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334730.1 → NP_001319388.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9K4
      UniProtKB/TrEMBL
      A0A5S9WUW8, A0A654EUM5
      Conserved Domains (1) summary
      pfam03547
      Location:11 → 407
      Mem_trans; Membrane transport protein

    2. NM_001334731.1 → NP_001321045.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9K4
      UniProtKB/TrEMBL
      A0A5S9WUW8, A0A654EUM5
      Conserved Domains (1) summary
      pfam03547
      Location:11 → 407
      Mem_trans; Membrane transport protein

    3. NM_001334732.1 → NP_001321044.1  Auxin efflux carrier family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APP3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C9K4.1

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