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    D-isomer specific 2-hydroxyacid dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843551, updated on 18-Sep-2024

    Summary

    Official Full Name
    D-isomer specific 2-hydroxyacid dehydrogenase family protein
    Primary source
    TAIR:AT1G72190
    Locus tag
    AT1G72190
    See related
    Araport:AT1G72190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9N14.9; T9N14_9
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (27167363..27169754, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene MICOS complex subunit, putative (DUF543) Neighboring gene E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

    General gene information

    NM_105878.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    D-isomer specific 2-hydroxyacid dehydrogenase family protein
    NP_177364.2
    • D-isomer specific 2-hydroxyacid dehydrogenase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: homoserine biosynthetic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (InterPro:IPR006139), D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-3-phosphoglycerate dehydrogenase (TAIR:AT4G34200.1); Has 28327 Blast hits to 28320 proteins in 2696 species: Archae - 466; Bacteria - 17634; Metazoa - 719; Fungi - 1167; Plants - 499; Viruses - 5; Other Eukaryotes - 7837 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27167363..27169754 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105878.4NP_177364.2  D-isomer specific 2-hydroxyacid dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177364.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WTL2, A0A654ETE7, F4IBQ3
      Conserved Domains (2) summary
      PLN02928
      Location:34373
      PLN02928; oxidoreductase family protein
      COG0111
      Location:80353
      SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]