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    ZIP1 zinc transporter 1 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820457, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ZIP1
    Official Full Name
    zinc transporter 1 precursor
    Primary source
    TAIR:AT3G12750
    Locus tag
    AT3G12750
    See related
    Araport:AT3G12750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtZIP1; zinc transporter 1 precursor
    Summary
    A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root.
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    Genomic context

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    See ZIP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (4051651..4053201, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene ALA-interacting subunit 1 Neighboring gene defective in cullin neddylation protein Neighboring gene mitochondrial editing factor 22 Neighboring gene ubiquitin-conjugating enzyme family protein Neighboring gene phosphoglycerate kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic relationships within cation transporter families of Arabidopsis. Mäser P, et al. Plant Physiol, 2001 Aug. PMID 11500563, Free PMC Article
    2. Identification of a family of zinc transporter genes from Arabidopsis that respond to zinc deficiency. Grotz N, et al. Proc Natl Acad Sci U S A, 1998 Jun 9. PMID 9618566, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_112111.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables zinc ion transmembrane transporter activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to zinc ion NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within zinc ion transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in zinc ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within zinc ion transport TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc transporter 1 precursor
    NP_187881.1
    • zinc transporter 1 precursor (ZIP1); FUNCTIONS IN: zinc ion transmembrane transporter activity; INVOLVED IN: response to zinc ion, zinc ion transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 5 precursor (TAIR:AT1G05300.1); Has 2022 Blast hits to 1850 proteins in 281 species: Archae - 0; Bacteria - 109; Metazoa - 565; Fungi - 630; Plants - 510; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4051651..4053201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112111.3 → NP_187881.1  zinc transporter 1 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187881.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81123
      UniProtKB/TrEMBL
      A0A178VFE3, A0A384LIN1, A0A5S9XC30, A0A654FBS7, Q0WW28
      Conserved Domains (1) summary
      TIGR00820
      Location:32 → 355
      zip; ZIP zinc/iron transport family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81123.1

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