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    FLA3 FASCICLIN-like arabinogalactan protein 3 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816981, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FLA3
    Official Full Name
    FASCICLIN-like arabinogalactan protein 3 precursor
    Primary source
    TAIR:AT2G24450
    Locus tag
    AT2G24450
    See related
    Araport:AT2G24450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    FASCICLIN-like arabinogalactan protein 3 precursor; T28I24.18; T28I24_18
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    Genomic context

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    See FLA3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (10392787..10393976, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene DNA repair ATPase-like protein Neighboring gene NAC domain containing protein 38 Neighboring gene selenium binding protein Neighboring gene C3HC4-type RING finger protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The fasciclin-like arabinogalactan protein gene, FLA3, is involved in microspore development of Arabidopsis. Li J, et al. Plant J, 2010 Nov. PMID 20807209
    2. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
    3. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. FLA3 is involved in microspore development. Overexpression caused defective elongation of stamen filaments and reduced female fertility.
      Title: The fasciclin-like arabinogalactan protein gene, FLA3, is involved in microspore development of Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_128006.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    FASCICLIN-like arabinogalactan protein 3 precursor
    NP_180021.1
    • FASCICLIN-like arabinogalactan protein 3 precursor (FLA3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: anchored to membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 5 precursor (TAIR:AT4G31370.1); Has 10338 Blast hits to 6301 proteins in 702 species: Archae - 8; Bacteria - 2389; Metazoa - 2056; Fungi - 1063; Plants - 2613; Viruses - 640; Other Eukaryotes - 1569 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10392787..10393976 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128006.5 → NP_180021.1  FASCICLIN-like arabinogalactan protein 3 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180021.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQ23
      UniProtKB/TrEMBL
      A0A178W0S4, A0A5S9X0S7
      Conserved Domains (2) summary
      PHA03307
      Location:213 → 268
      PHA03307; transcriptional regulator ICP4; Provisional
      cl02663
      Location:35 → 138
      Fasciclin; Fasciclin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQ23.1

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