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    Protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820572, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Protein kinase family protein
    Primary source
    TAIR:AT3G13670
    Locus tag
    AT3G13670
    See related
    Araport:AT3G13670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    16
    Sequence:
    Chromosome: 3; NC_003074.8 (4469153..4473547)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene TRAF-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene F-box and associated interaction domains-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation of Histone H2A at Serine 95: A Plant-Specific Mark Involved in Flowering Time Regulation and H2A.Z Deposition. Su Y, et al. Plant Cell, 2017 Sep. PMID 28790150, Free PMC Article
    2. Molecular basis for blue light-dependent phosphorylation of Arabidopsis cryptochrome 2. Liu Q, et al. Nat Commun, 2017 May 11. PMID 28492234, Free PMC Article
    3. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Huang H, et al. Mol Cell Proteomics, 2016 Jan. PMID 26545401, Free PMC Article
    4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112214.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables histone kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within long-day photoperiodism, flowering IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in post-translational protein modification IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein kinase family protein
    NP_187977.1
    • Protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase family protein (TAIR:AT2G25760.1); Has 17131 Blast hits to 17075 proteins in 1486 species: Archae - 12; Bacteria - 5943; Metazoa - 4767; Fungi - 1425; Plants - 2358; Viruses - 214; Other Eukaryotes - 2412 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4469153..4473547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112214.5 → NP_187977.1  Protein kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187977.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VCR8, A0A384LQ27, A0A7G2EPX0, Q9LID3
      Conserved Domains (1) summary
      cd14016
      Location:137 → 412
      STKc_CK1; Catalytic domain of the Serine/Threonine protein kinase, Casein Kinase 1
    Nucleotide Protein
    Heading Accession and Version

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