U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FER2 ferritin 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820276, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    FER2
    Official Full Name
    ferritin 2
    Primary source
    TAIR:AT3G11050
    Locus tag
    AT3G11050
    See related
    Araport:AT3G11050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATFER2; ferritin 2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FER2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (3463477..3465506)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DCD (Development and Cell Death) domain protein Neighboring gene receptor like protein 34 Neighboring gene DRE/CRT-binding protein 2B Neighboring gene TRICHOME BIREFRINGENCE-LIKE 32 Neighboring gene Glycosyl hydrolase family 85 Neighboring gene uncharacterized protein Neighboring gene Outer membrane OMP85 family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Post-translational regulation of AtFER2 ferritin in response to intracellular iron trafficking during fruit development in Arabidopsis. Ravet K, et al. Mol Plant, 2009 Sep. PMID 19825683
    2. Ferritins control interaction between iron homeostasis and oxidative stress in Arabidopsis. Ravet K, et al. Plant J, 2009 Feb. PMID 18826427
    3. Structure and differential expression of the four members of the Arabidopsis thaliana ferritin gene family. Petit JM, et al. Biochem J, 2001 Nov 1. PMID 11672431, Free PMC Article
    4. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Post-translational regulation of AtFER2 ferritin in response to intracellular iron trafficking during fruit development in Arabidopsis.
      Title: Post-translational regulation of AtFER2 ferritin in response to intracellular iron trafficking during fruit development in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    NM_111942.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ferric iron binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ferroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in iron ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ferritin 2
    NP_187716.1
    • ferritin 2 (FER2); FUNCTIONS IN: oxidoreductase activity, ferric iron binding, binding, transition metal ion binding; INVOLVED IN: response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Ferritin, N-terminal (InterPro:IPR001519), Ferritin-related (InterPro:IPR012347), Ferritin-like (InterPro:IPR009040), Ferritin, conserved site (InterPro:IPR014034), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Ferritin/Dps protein (InterPro:IPR008331); BEST Arabidopsis thaliana protein match is: ferritin 4 (TAIR:AT2G40300.1); Has 4033 Blast hits to 4031 proteins in 1061 species: Archae - 169; Bacteria - 1584; Metazoa - 1680; Fungi - 11; Plants - 350; Viruses - 0; Other Eukaryotes - 239 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3463477..3465506
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111942.4 → NP_187716.1  ferritin 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187716.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42288, Q8L9N6, Q8WHW4, Q9SRL5
      UniProtKB/TrEMBL
      A0A654F7Q1
      Conserved Domains (2) summary
      cd01056
      Location:86 → 246
      Euk_Ferritin; eukaryotic ferritins
      pfam00210
      Location:92 → 235
      Ferritin; Ferritin-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SRL5.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools