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    Auxin-responsive GH3 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841288, updated on 18-Sep-2024

    Summary

    Official Full Name
    Auxin-responsive GH3 family protein
    Primary source
    TAIR:AT1G48660
    Locus tag
    AT1G48660
    See related
    Araport:AT1G48660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11I4.15; F11I4_15
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (17995785..17998037, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene peroxin 3 Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene auxin-responsive GH3 family protein Neighboring gene pseudo

    General protein information

    Preferred Names
    Auxin-responsive GH3 family protein
    NP_175299.1
    • Auxin-responsive GH3 family protein; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: auxin-responsive GH3 family protein (TAIR:AT1G48670.1); Has 1415 Blast hits to 1338 proteins in 229 species: Archae - 0; Bacteria - 452; Metazoa - 52; Fungi - 2; Plants - 674; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17995785..17998037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333346.1NP_001322825.1  Auxin-responsive GH3 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AV88, A0A5S9WKL4, A0A654EHD3
    2. NM_103762.1NP_175299.1  Auxin-responsive GH3 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175299.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WKL4, A0A654EHD3, Q9C735
      Conserved Domains (2) summary
      cl21606
      Location:7569
      PLN02247; indole-3-acetic acid-amido synthetase
      pfam03321
      Location:10550
      GH3; GH3 auxin-responsive promoter