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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838255, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G16840
    Locus tag
    AT1G16840
    See related
    Araport:AT1G16840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17F16.27
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (5762694..5764184, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Reticulon family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene uncharacterized protein Neighboring gene Ubiquitin-specific protease family C19-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332268.1
    NM_101545.4
    NM_179345.2
    NM_179346.4
    NM_202117.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_564007.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_849676.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_849677.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_973846.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5762694..5764184 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101545.4 → NP_564007.1  uncharacterized protein AT1G16840 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564007.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDG2, Q9FZ44

    2. NM_001332268.1 → NP_001321908.1  uncharacterized protein AT1G16840 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8W589

    3. NM_179345.2 → NP_849676.1  uncharacterized protein AT1G16840 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849676.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8W589

    4. NM_179346.4 → NP_849677.1  uncharacterized protein AT1G16840 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849677.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDG2, Q9FZ44

    5. NM_202117.2 → NP_973846.1  uncharacterized protein AT1G16840 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973846.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WDG2, Q9FZ44
    Nucleotide Protein
    Heading Accession and Version

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