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    DC1 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827483, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DC1 domain-containing protein
    Primary source
    TAIR:AT4G02180
    Locus tag
    AT4G02180
    See related
    Araport:AT4G02180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T10M13.24; T10M13_24
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (959964..963678)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cotton fiber protein Neighboring gene cotton fiber protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene syntaxin of plants 42

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DC1 domain-containing protein
    NP_192127.1
    • DC1 domain-containing protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01930.1); Has 3165 Blast hits to 732 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 3102; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      959964..963678
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116450.2 → NP_192127.1  DC1 domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192127.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XPW1, A0A654FL71, Q9ZU00
      Conserved Domains (2) summary
      pfam03107
      Location:893 → 923
      C1_2; C1 domain
      pfam07649
      Location:731 → 760
      C1_3; C1-like domain
    Nucleotide Protein
    Heading Accession and Version

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