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    T-complex protein 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826496, updated on 18-Sep-2024

    Summary

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    Official Full Name
    T-complex protein 11
    Primary source
    TAIR:AT4G09150
    Locus tag
    AT4G09150
    See related
    Araport:AT4G09150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23J3.180; F23J3_180
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (5828505..5833725)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene low-molecular-weight cysteine-rich 36 Neighboring gene SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203764.1
    NM_116984.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    T-complex protein 11
    NP_001190693.1
    • T-complex protein 11; FUNCTIONS IN: phosphopantetheine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT1G22930.1).
    NP_192654.1
    • T-complex protein 11; FUNCTIONS IN: phosphopantetheine binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: T-complex 11 (InterPro:IPR008862), Phosphopantetheine attachment site (InterPro:IPR006162); BEST Arabidopsis thaliana protein match is: T-complex protein 11 (TAIR:AT1G22930.1); Has 14735 Blast hits to 9884 proteins in 1062 species: Archae - 66; Bacteria - 2337; Metazoa - 6091; Fungi - 1162; Plants - 694; Viruses - 23; Other Eukaryotes - 4362 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      5828505..5833725
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116984.5 → NP_192654.1  T-complex protein 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192654.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V2E1, A0A654FMX9, Q9M0R3
      Conserved Domains (1) summary
      pfam05794
      Location:609 → 1091
      Tcp11; T-complex protein 11

    2. NM_001203764.1 → NP_001190693.1  T-complex protein 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190693.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V2E1, A0A654FMX9, F4JJB2
      Conserved Domains (1) summary
      pfam05794
      Location:610 → 1092
      Tcp11; T-complex protein 11
    Nucleotide Protein
    Heading Accession and Version

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