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    CRK29 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827893, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRK29
    Official Full Name
    cysteine-rich RLK (RECEPTOR-like protein kinase) 29
    Primary source
    TAIR:AT4G21410
    Locus tag
    AT4G21410
    See related
    Araport:AT4G21410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    cysteine-rich RLK (RECEPTOR-like protein kinase) 29; F18E5.30
    Summary
    Encodes a cysteine-rich receptor-like protein kinase.
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    Genomic context

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    See CRK29 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (11401711..11405235, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene receptor kinase 3 Neighboring gene S-locus lectin protein kinase family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 28 Neighboring gene miscRNA Neighboring gene pseudo Neighboring gene protein B160

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. Xin Z, et al. Plant Physiol, 2005 Nov. PMID 16258012, Free PMC Article
    2. Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. Szponarski W, et al. Proteomics, 2004 Feb. PMID 14760709
    3. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Lumba S, et al. Dev Cell, 2014 May 12. PMID 24823379
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341488.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    cysteine-rich RLK (RECEPTOR-like protein kinase) 29
    NP_001320020.1
    • cysteine-rich RLK (RECEPTOR-like protein kinase) 29 (CRK29); FUNCTIONS IN: kinase activity; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 28 (TAIR:AT4G21400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11401711..11405235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118261.4 → NP_193872.2  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193872.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65406, Q8S9L6
      UniProtKB/TrEMBL
      A0A178V3N0, A0A5S9XUX2, A0A654FRE6
      Conserved Domains (2) summary
      cd14066
      Location:363 → 632
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam01657
      Location:38 → 130
      Stress-antifung; Salt stress response/antifungal

    2. NM_001341489.1 → NP_001329810.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8X4

    3. NM_001341488.1 → NP_001320020.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 29 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V3N0, A0A2H1ZEN4, A0A5S9XUX2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S9L6.1

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