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    PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828446, updated on 18-Sep-2024

    Summary

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    Official Full Name
    PLAC8 family protein
    Primary source
    TAIR:AT4G23470
    Locus tag
    AT4G23470
    See related
    Araport:AT4G23470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16G20.170; F16G20_170
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (12248842..12251396)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene RING/U-box superfamily protein Neighboring gene Adaptin family protein Neighboring gene fringe-like protein (DUF604) Neighboring gene uncharacterized protein Neighboring gene SPIRAL1-like5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    2. Proteome-wide screens for small ubiquitin-like modifier (SUMO) substrates identify Arabidopsis proteins implicated in diverse biological processes. Elrouby N, et al. Proc Natl Acad Sci U S A, 2010 Oct 5. PMID 20855607, Free PMC Article
    3. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036625.1
    NM_001341618.1
    NM_118476.4
    NM_202868.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    PLAC8 family protein
    NP_001031702.1
    • PLAC8 family protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_194078.2
    • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 7925 Blast hits to 4553 proteins in 452 species: Archae - 4; Bacteria - 911; Metazoa - 2683; Fungi - 783; Plants - 1518; Viruses - 367; Other Eukaryotes - 1659 (source: NCBI BLink).
    NP_974597.1
    • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT1G63830.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12248842..12251396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118476.4 → NP_194078.2  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194078.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FS81, Q681W8, Q8W458
      Conserved Domains (1) summary
      NF033761
      Location:181 → 241
      gliding_GltJ; adventurous gliding motility protein GltJ

    2. NM_202868.2 → NP_974597.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974597.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWB6, Q67XV0, Q8LCK6
      Conserved Domains (1) summary
      pfam09849
      Location:125 → 182
      DUF2076; Uncharacterized protein conserved in bacteria (DUF2076)

    3. NM_001341618.1 → NP_001328267.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B421

    4. NM_001036625.1 → NP_001031702.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031702.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JNK5, Q681W9
    Nucleotide Protein
    Heading Accession and Version

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