Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Primary source: TAIR:AT4G26190
Locus tag: AT4G26190
See related: Araport:AT4G26190
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T25K17.7
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 7

Sequence:: Chromosome: 4; NC_003075.7 (13262139..13267020, complement)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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NM_001341787.1

Supported by ESTs:

NM_001341788.1

Supported by ESTs:

NM_001341789.1

Supported by ESTs:

NM_001341790.1

Supported by ESTs:

NM_118752.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

NP_194349.2

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 27570 Blast hits to 17450 proteins in 1040 species: Archae - 84; Bacteria - 2677; Metazoa - 10403; Fungi - 2363; Plants - 1406; Viruses - 96; Other Eukaryotes - 10541 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

13262139..13267020 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_118752.5 → NP_194349.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_194349.2

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XWC5, F4JU71

Conserved Domains (1) summary

pfam03031
Location:844 → 1026

NIF; NLI interacting factor-like phosphatase
NM_001341787.1 → NP_001328352.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XWC5, F4JU71
NM_001341790.1 → NP_001328350.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XWC5, F4JU71
NM_001341789.1 → NP_001328353.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XWC5, F4JU71
NM_001341788.1 → NP_001328351.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A5S9XWC5, F4JU71