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    RD26 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828849, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RD26
    Official Full Name
    NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    Primary source
    TAIR:AT4G27410
    Locus tag
    AT4G27410
    See related
    Araport:AT4G27410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ANAC072; Arabidopsis NAC domain containing protein 72; AtRD26; F27G19.10; F27G19_10; RESPONSIVE TO DESICCATION 26
    Summary
    Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.
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    Genomic context

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    See RD26 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (13707192..13709170, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Phe Neighboring gene Late embryogenesis abundant (LEA) protein-like protein Neighboring gene uncharacterized protein Neighboring gene ABC-2 type transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence. Kamranfar I, et al. New Phytol, 2018 Jun. PMID 29659022
    2. The role of ANAC072 in the regulation of chlorophyll degradation during age- and dark-induced leaf senescence. Li S, et al. Plant Cell Rep, 2016 Aug. PMID 27154758
    3. A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway. Fujita M, et al. Plant J, 2004 Sep. PMID 15341629
    4. RD26 mediates crosstalk between drought and brassinosteroid signalling pathways. Ye H, et al. Nat Commun, 2017 Feb 24. PMID 28233777, Free PMC Article
    5. Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. Tran LS, et al. Plant Cell, 2004 Sep. PMID 15319476, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. during senescence RD26 acts by controlling the expression of genes across the entire spectrum of the cellular degradation hierarchy.
      Title: Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence.
    2. Study confirmed that RD26 is a target gene of BES1 and negatively regulates the brassinosteroids signaling pathway.
      Title: RD26 mediates crosstalk between drought and brassinosteroid signalling pathways.
    3. ANAC072 may promote chlorophyll degradation by directly upregulating the expression of NYE1.
      Title: The role of ANAC072 in the regulation of chlorophyll degradation during age- and dark-induced leaf senescence.
    4. Involvement of ANAC072in the regulation of jasmonic acid-induced chlorophyll degradation
      Title: Jasmonic acid promotes degreening via MYC2/3/4- and ANAC019/055/072-mediated regulation of major chlorophyll catabolic genes.
    5. RD26 functions as a transcriptional activator in abscisic acid-inducible gene expression under abiotic stress in plants.
      Title: A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084983.1
    NM_118875.4
    NM_179126.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables promoter-specific chromatin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of leaf senescence IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
    NP_001078452.1
    • RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 2991 Blast hits to 2983 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2991; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_567773.1
    • RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_849457.1
    • RESPONSIVE TO DESICCATION 26 (RD26); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 19 (TAIR:AT1G52890.1); Has 297 Blast hits to 297 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13707192..13709170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118875.4 → NP_567773.1  NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567773.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H141, Q93VY3, Q94II4, Q9SZR8
      UniProtKB/TrEMBL
      A0A178UUP7, A0A5S9XWC4, A0A654FTB7
      Conserved Domains (1) summary
      pfam02365
      Location:15 → 139
      NAM; No apical meristem (NAM) protein

    2. NM_179126.1 → NP_849457.1  NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JIV0

    3. NM_001084983.1 → NP_001078452.1  NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078452.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUP7, F4JIU9
      Conserved Domains (1) summary
      pfam02365
      Location:17 → 58
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93VY3.1

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