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    XTH26 xyloglucan endotransglucosylase/hydrolase 26 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829006, updated on 18-Sep-2024

    Summary

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    Official Symbol
    XTH26
    Official Full Name
    xyloglucan endotransglucosylase/hydrolase 26
    Primary source
    TAIR:AT4G28850
    Locus tag
    AT4G28850
    See related
    Araport:AT4G28850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATXTH26; F16A16.40; F16A16_40; xyloglucan endotransglucosylase/hydrolase 26
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    Genomic context

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    See XTH26 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (14244290..14246037)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene mediator of RNA polymerase II transcription subunit Neighboring gene casein kinase I-like 4 Neighboring gene mutator transposase MUDRA protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Enzymic characterization of two recombinant xyloglucan endotransglucosylase/hydrolase (XTH) proteins of Arabidopsis and their effect on root growth and cell wall extension. Maris A, et al. J Exp Bot, 2009. PMID 19635745
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtXTH14: At4g25820 and AtXTH26: At4g28850 reduced cell wall extension and caused abnormal root hair morphology.
      Title: Enzymic characterization of two recombinant xyloglucan endotransglucosylase/hydrolase (XTH) proteins of Arabidopsis and their effect on root growth and cell wall extension.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    NM_119029.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables polysaccharide binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables xyloglucan:xyloglucosyl transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in xyloglucan metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    xyloglucan endotransglucosylase/hydrolase 26
    NP_194614.1
    • xyloglucan endotransglucosylase/hydrolase 26 (XTH26); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 2230 Blast hits to 2210 proteins in 325 species: Archae - 0; Bacteria - 312; Metazoa - 0; Fungi - 457; Plants - 1370; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14244290..14246037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119029.3 → NP_194614.1  xyloglucan endotransglucosylase/hydrolase 26 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194614.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WLG1, Q9SVV2
      UniProtKB/TrEMBL
      A0A178URX5, A0A5S9XWU5
      Conserved Domains (1) summary
      PLN03161
      Location:1 → 292
      PLN03161; Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SVV2.1

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