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    ELI3-1 cinnamyl alcohol dehydrogenase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829954, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ELI3-1
    Official Full Name
    cinnamyl alcohol dehydrogenase 7
    Primary source
    TAIR:AT4G37980
    Locus tag
    AT4G37980
    See related
    Araport:AT4G37980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCAD7; CAD7; CINNAMYL-ALCOHOL DEHYDROGENASE 7; ELI3; ELICITOR-ACTIVATED GENE 3; elicitor-activated gene 3-1; F20D10.100; F20D10_100
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    Genomic context

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    See ELI3-1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (17852441..17854608)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Rhamnogalacturonate lyase family protein Neighboring gene cinnamyl alcohol dehydrogenase 6 Neighboring gene cinnamyl alcohol dehydrogenase 8 Neighboring gene uncharacterized protein Neighboring gene DNA binding with one finger 4.7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a Hexenal Reductase That Modulates the Composition of Green Leaf Volatiles. Tanaka T, et al. Plant Physiol, 2018 Oct. PMID 30126866, Free PMC Article
    2. Rapid activation of a novel plant defense gene is strictly dependent on the Arabidopsis RPM1 disease resistance locus. Kiedrowski S, et al. EMBO J, 1992 Dec. PMID 1464303, Free PMC Article
    3. Expression of cinnamyl alcohol dehydrogenases and their putative homologues during Arabidopsis thaliana growth and development: lessons for database annotations? Kim SJ, et al. Phytochemistry, 2007 Jul. PMID 17467016
    4. Functional reclassification of the putative cinnamyl alcohol dehydrogenase multigene family in Arabidopsis. Kim SJ, et al. Proc Natl Acad Sci U S A, 2004 Feb 10. PMID 14745009, Free PMC Article
    5. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001036728.2
    NM_119959.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cinnamyl-alcohol dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables cinnamyl-alcohol dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within green leaf volatile biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in lignin biosynthetic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type hypersensitive response IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    cinnamyl alcohol dehydrogenase 7
    NP_001031805.1
    • elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 38486 Blast hits to 38464 proteins in 3055 species: Archae - 808; Bacteria - 25722; Metazoa - 1237; Fungi - 2883; Plants - 3069; Viruses - 3; Other Eukaryotes - 4764 (source: NCBI BLink).
    NP_195511.1
    • elicitor-activated gene 3-1 (ELI3-1); FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to bacterium, plant-type hypersensitive response; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: elicitor-activated gene 3-2 (TAIR:AT4G37990.1); Has 39128 Blast hits to 39104 proteins in 3053 species: Archae - 813; Bacteria - 26065; Metazoa - 1241; Fungi - 2911; Plants - 3099; Viruses - 3; Other Eukaryotes - 4996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17852441..17854608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119959.4 → NP_195511.1  cinnamyl alcohol dehydrogenase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195511.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DG76, O65622, Q02971, Q53ZN3, Q9SZJ9
      UniProtKB/TrEMBL
      A0A178V3X8, A0A5S9Y020, C0Z2U0
      Conserved Domains (1) summary
      PLN02586
      Location:1 → 355
      PLN02586; probable cinnamyl alcohol dehydrogenase

    2. NM_001036728.2 → NP_001031805.1  cinnamyl alcohol dehydrogenase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031805.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0Z2U0
      Conserved Domains (1) summary
      cd05283
      Location:10 → 296
      CAD1; Cinnamyl alcohol dehydrogenases (CAD)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q02971.2

    Gene LinkOut

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