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    Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830110, updated on 18-Sep-2024

    Summary

    Official Full Name
    Galactose oxidase/kelch repeat superfamily protein
    Primary source
    TAIR:AT4G39560
    Locus tag
    AT4G39560
    See related
    Araport:AT4G39560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23K16.190; F23K16_190
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (18382259..18383885, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene shikimate kinase 2 Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    General gene information

    NM_120116.4
    NM_202987.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast  

    General protein information

    Preferred Names
    Galactose oxidase/kelch repeat superfamily protein
    NP_195666.2
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G49000.2); Has 3492 Blast hits to 2791 proteins in 179 species: Archae - 4; Bacteria - 195; Metazoa - 1983; Fungi - 9; Plants - 1156; Viruses - 39; Other Eukaryotes - 106 (source: NCBI BLink).
    NP_974716.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G49000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18382259..18383885 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202987.3 → NP_974716.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974716.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XN8, Q9SVA2
      UniProtKB/TrEMBL
      A0A178V3F4
      Conserved Domains (4) summary
      PHA03098
      Location:111 → 247
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:123 → 162
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:27 → 69
      F-box; F-box domain
      pfam01344
      Location:166 → 206
      Kelch_1; Kelch motif
    2. NM_120116.4 → NP_195666.2  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195666.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XN8, Q9SVA2
      UniProtKB/TrEMBL
      A0A178V3F4
      Conserved Domains (4) summary
      PHA03098
      Location:111 → 247
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:123 → 162
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:27 → 69
      F-box; F-box domain
      pfam01344
      Location:166 → 206
      Kelch_1; Kelch motif
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