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    fanconi anemia group F protein (FANCF) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834424, updated on 18-Sep-2024

    Summary

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    Official Full Name
    fanconi anemia group F protein (FANCF)
    Primary source
    TAIR:AT5G44010
    Locus tag
    AT5G44010
    See related
    Araport:AT5G44010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MRH10.12; MRH10_12
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (17706396..17709326, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SET-domain containing protein lysine methyltransferase family protein Neighboring gene Glutathione S-transferase family protein Neighboring gene uncharacterized protein Neighboring gene HAD superfamily, subfamily IIIB acid phosphatase Neighboring gene cellulose synthase A4 Neighboring gene eisosome SEG2-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123768.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Fanconi anaemia nuclear complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    fanconi anemia group F protein (FANCF)
    NP_199214.2
    • unknown protein; Has 28 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17706396..17709326 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344527.1 → NP_001330019.1  fanconi anemia group F protein (FANCF) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9K4, A0A5S9YAU2, A0A7G2FGJ5
      Conserved Domains (1) summary
      pfam11107
      Location:11 → 151
      FANCF; Fanconi anemia group F protein (FANCF)

    2. NM_001344525.1 → NP_001330021.1  fanconi anemia group F protein (FANCF) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URI6, A0A1P8B9J1, A0A384LFP4, A0A5S9YAU2
      Conserved Domains (1) summary
      pfam11107
      Location:11 → 151
      FANCF; Fanconi anemia group F protein (FANCF)

    3. NM_001344526.1 → NP_001330020.1  fanconi anemia group F protein (FANCF) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQA9, A0A178UQK4, A0A1P8B9I7, A0A384LQ12

    4. NM_123768.2 → NP_199214.2  fanconi anemia group F protein (FANCF) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199214.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K7F0, Q9FNC5
    Nucleotide Protein
    Heading Accession and Version

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