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    Ribosomal protein L9/RNase H1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835387, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein L9/RNase H1
    Primary source
    TAIR:AT5G53070
    Locus tag
    AT5G53070
    See related
    Araport:AT5G53070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MNB8.13; MNB8_13
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (21518593..21520421)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene miscRNA Neighboring gene RNA-binding KH domain-containing protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124686.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein L9/RNase H1
    NP_200119.1
    • Ribosomal protein L9/RNase H1; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L9 (InterPro:IPR000244), Ribosomal protein L9/RNase H1, N-terminal (InterPro:IPR009027), Ribosomal protein L9, N-terminal (InterPro:IPR020070), Ribosomal protein L9, C-terminal (InterPro:IPR020069); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21518593..21520421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124686.3 → NP_200119.1  Ribosomal protein L9/RNase H1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200119.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UBR6, A0A5S9YDI0, Q9LVU5
      Conserved Domains (1) summary
      PRK00137
      Location:45 → 198
      rplI; 50S ribosomal protein L9; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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