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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835787, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G56850
    Locus tag
    AT5G56850
    See related
    Araport:AT5G56850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIK19.5; MIK19_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (22985115..22988110, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene myb-like transcription factor family protein Neighboring gene GATA type zinc finger transcription factor family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001345218.1
    NM_001345219.1
    NM_001345220.1
    NM_001345221.1
    NM_001345222.1
    NM_001345223.1
    NM_125068.4
    NM_203215.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001318815.1
    • unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_200496.2
    • unknown protein; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22985115..22988110 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125068.4 → NP_200496.2  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200496.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9D4, A0A654GBR3, F4K940

    2. NM_001345219.1 → NP_001332288.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9D4, A0A1P8BGF9

    3. NM_001345218.1 → NP_001318815.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAY7, Q9FJS8

    4. NM_001345220.1 → NP_001332284.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9D4, A0A654GBR3, F4K940

    5. NM_001345221.1 → NP_001332285.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAY7, Q9FJS8

    6. NM_001345223.1 → NP_001332287.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9D4, A0A1P8BGH5

    7. NM_001345222.1 → NP_001332286.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U9D4, A0A1P8BGG6

    8. NM_203215.1 → NP_974944.1  uncharacterized protein AT5G56850 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974944.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UAY7, Q9FJS8
    Nucleotide Protein
    Heading Accession and Version

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